Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 AC005840.4-201ENST00000541242 2494 ntBASIC13.37□□□□□ -0.27
CENPAP49450 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.37□□□□□ -0.27
CENPAP49450 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.37□□□□□ -0.27
CENPAP49450 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 KRT8P22-201ENST00000562317 1415 ntBASIC13.37□□□□□ -0.27
CENPAP49450 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CENPAP49450 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.37□□□□□ -0.27
CENPAP49450 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.37□□□□□ -0.27
CENPAP49450 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CENPAP49450 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CENPAP49450 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 AC152010.1-201ENST00000415779 2006 ntBASIC13.36□□□□□ -0.27
CENPAP49450 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 AC087499.6-201ENST00000411576 835 ntBASIC13.36□□□□□ -0.27
CENPAP49450 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.36□□□□□ -0.27
CENPAP49450 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.36□□□□□ -0.27
CENPAP49450 DFFBP1-201ENST00000433250 979 ntBASIC13.36□□□□□ -0.27
CENPAP49450 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.36□□□□□ -0.27
CENPAP49450 GIMAP3P-201ENST00000495150 836 ntBASIC13.36□□□□□ -0.27
CENPAP49450 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.36□□□□□ -0.27
CENPAP49450 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.36□□□□□ -0.27
CENPAP49450 AC092552.1-201ENST00000547243 906 ntBASIC13.36□□□□□ -0.27
CENPAP49450 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.36□□□□□ -0.27
CENPAP49450 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 BEND3P1-201ENST00000421591 1944 ntBASIC13.36□□□□□ -0.27
CENPAP49450 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.36□□□□□ -0.27
CENPAP49450 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CENPAP49450 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CENPAP49450 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CENPAP49450 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CENPAP49450 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CENPAP49450 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CENPAP49450 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms