Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 AC007881.3-201ENST00000608897 607 ntBASIC16.62■□□□□ 0.25
COPB2P35606 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 AC023908.3-201ENST00000564211 3047 ntBASIC16.62■□□□□ 0.25
COPB2P35606 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.62■□□□□ 0.25
COPB2P35606 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.62■□□□□ 0.25
COPB2P35606 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPB2P35606 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.61■□□□□ 0.25
COPB2P35606 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.61■□□□□ 0.25
COPB2P35606 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.61■□□□□ 0.25
COPB2P35606 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.61■□□□□ 0.25
COPB2P35606 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.61■□□□□ 0.25
COPB2P35606 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 AC135983.4-201ENST00000564116 1262 ntBASIC16.61■□□□□ 0.25
COPB2P35606 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.61■□□□□ 0.25
COPB2P35606 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPB2P35606 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPB2P35606 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COPB2P35606 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 AC015688.4-201ENST00000580780 1647 ntBASIC16.6■□□□□ 0.25
COPB2P35606 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.6■□□□□ 0.25
COPB2P35606 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COPB2P35606 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.6■□□□□ 0.25
COPB2P35606 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.6■□□□□ 0.25
COPB2P35606 MIR4522-201ENST00000584932 87 ntBASIC16.6■□□□□ 0.25
COPB2P35606 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.6■□□□□ 0.25
COPB2P35606 AC021016.3-201ENST00000608367 477 ntBASIC16.6■□□□□ 0.25
COPB2P35606 AC090386.2-201ENST00000623010 1039 ntBASIC16.6■□□□□ 0.25
COPB2P35606 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COPB2P35606 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
COPB2P35606 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.6■□□□□ 0.25
COPB2P35606 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPB2P35606 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms