Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR3188-201ENST00000583494 85 ntBASIC12.56□□□□□ -0.4
CD40P25942 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.56□□□□□ -0.4
CD40P25942 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.56□□□□□ -0.4
CD40P25942 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 AGGF1P1-201ENST00000509500 2073 ntBASIC12.56□□□□□ -0.4
CD40P25942 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.56□□□□□ -0.4
CD40P25942 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CD40P25942 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CD40P25942 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CD40P25942 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 KRT8P19-201ENST00000551916 1455 ntBASIC12.55□□□□□ -0.4
CD40P25942 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.55□□□□□ -0.4
CD40P25942 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 AC073150.1-201ENST00000450406 1084 ntBASIC12.55□□□□□ -0.4
CD40P25942 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.55□□□□□ -0.4
CD40P25942 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.55□□□□□ -0.4
CD40P25942 AC134698.3-201ENST00000523880 214 ntBASIC12.55□□□□□ -0.4
CD40P25942 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.55□□□□□ -0.4
CD40P25942 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.55□□□□□ -0.4
CD40P25942 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 AC079336.7-201ENST00000623428 1078 ntBASIC12.55□□□□□ -0.4
CD40P25942 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 AC023824.1-201ENST00000562945 2975 ntBASIC12.55□□□□□ -0.4
CD40P25942 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 FRMPD2B-201ENST00000431305 1347 ntBASIC12.55□□□□□ -0.4
CD40P25942 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CD40P25942 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.55□□□□□ -0.4
CD40P25942 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CD40P25942 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.54□□□□□ -0.4
CD40P25942 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.54□□□□□ -0.4
CD40P25942 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD40P25942 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms