Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.73□□□□□ -0.21
CHMP24386 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.73□□□□□ -0.21
CHMP24386 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CHMP24386 RHOXF1P1-202ENST00000635473 501 ntBASIC13.73□□□□□ -0.21
CHMP24386 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CHMP24386 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 AC105206.1-202ENST00000314927 2368 ntBASIC13.73□□□□□ -0.21
CHMP24386 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CHMP24386 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CHMP24386 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHMP24386 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHMP24386 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 AC130686.1-201ENST00000622936 2466 ntBASIC13.72□□□□□ -0.21
CHMP24386 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 KRT8P24-201ENST00000560290 1559 ntBASIC13.72□□□□□ -0.21
CHMP24386 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHMP24386 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 CD8B2-202ENST00000417670 633 ntBASIC13.72□□□□□ -0.21
CHMP24386 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 RNA5SP486-201ENST00000515961 83 ntBASIC13.72□□□□□ -0.21
CHMP24386 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.72□□□□□ -0.21
CHMP24386 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 SNX29P1-201ENST00000548357 1007 ntBASIC13.72□□□□□ -0.21
CHMP24386 DUX4L47-201ENST00000566374 394 ntBASIC13.72□□□□□ -0.21
CHMP24386 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 AC244669.2-201ENST00000612320 853 ntBASIC13.72□□□□□ -0.21
CHMP24386 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 AC015818.8-201ENST00000587907 1519 ntBASIC13.72□□□□□ -0.21
CHMP24386 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CHMP24386 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.72□□□□□ -0.21
CHMP24386 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.72□□□□□ -0.21
CHMP24386 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CHMP24386 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.72□□□□□ -0.21
CHMP24386 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.71□□□□□ -0.21
CHMP24386 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.71□□□□□ -0.21
CHMP24386 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.71□□□□□ -0.21
CHMP24386 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CHMP24386 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 ANKRD19P-201ENST00000338192 862 ntBASIC13.71□□□□□ -0.21
CHMP24386 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CHMP24386 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHMP24386 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CHMP24386 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.71□□□□□ -0.21
CHMP24386 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.71□□□□□ -0.21
CHMP24386 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms