Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VAMP1P23763 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.43□□□□□ -0.42
VAMP1P23763 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 AL592309.1-201ENST00000443127 649 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.43□□□□□ -0.42
VAMP1P23763 AC069335.1-201ENST00000489972 472 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 RN7SKP64-201ENST00000517206 328 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VAMP1P23763 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VAMP1P23763 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.43□□□□□ -0.42
VAMP1P23763 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.43□□□□□ -0.42
VAMP1P23763 AC018529.1-201ENST00000613063 361 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.43□□□□□ -0.42
VAMP1P23763 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VAMP1P23763 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 AGAP10P-201ENST00000454844 2418 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 AC090643.2-201ENST00000623442 2029 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC12.43□□□□□ -0.42
VAMP1P23763 MYADML-201ENST00000474610 2147 ntBASIC12.43□□□□□ -0.42
VAMP1P23763 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC12.43□□□□□ -0.42
VAMP1P23763 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VAMP1P23763 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VAMP1P23763 HSPA8P5-201ENST00000456928 2069 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.42□□□□□ -0.42
VAMP1P23763 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.42□□□□□ -0.42
VAMP1P23763 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
VAMP1P23763 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 RNA5SP416-201ENST00000516838 111 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.42□□□□□ -0.42
VAMP1P23763 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.42□□□□□ -0.42
VAMP1P23763 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 AC145285.3-201ENST00000564603 959 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 RN7SL828P-201ENST00000607615 303 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 AL691432.3-201ENST00000621860 400 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 LINC00628-201ENST00000628516 1289 ntBASIC12.42□□□□□ -0.42
VAMP1P23763 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VAMP1P23763 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.42□□□□□ -0.42
VAMP1P23763 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VAMP1P23763 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.42□□□□□ -0.42
VAMP1P23763 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms