Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC119751.2-201ENST00000504529 210 ntBASIC14.86□□□□□ -0.03
NFKB1P19838 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.86□□□□□ -0.03
NFKB1P19838 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NFKB1P19838 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 MIR4741-201ENST00000579822 90 ntBASIC14.86□□□□□ -0.03
NFKB1P19838 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 AC064801.2-201ENST00000625052 1303 ntBASIC14.86□□□□□ -0.03
NFKB1P19838 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NFKB1P19838 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.86□□□□□ -0.03
NFKB1P19838 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NFKB1P19838 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.85□□□□□ -0.03
NFKB1P19838 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 MST1P2-201ENST00000457982 2291 ntBASIC14.85□□□□□ -0.03
NFKB1P19838 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 CSF2RBP1-201ENST00000447905 391 ntBASIC14.85□□□□□ -0.03
NFKB1P19838 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 AC022210.1-201ENST00000449856 793 ntBASIC14.85□□□□□ -0.03
NFKB1P19838 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.85□□□□□ -0.03
NFKB1P19838 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.85□□□□□ -0.03
NFKB1P19838 AC005586.2-201ENST00000563946 837 ntBASIC14.85□□□□□ -0.03
NFKB1P19838 DUX4L46-201ENST00000566845 751 ntBASIC14.85□□□□□ -0.03
NFKB1P19838 MIR4783-201ENST00000580343 82 ntBASIC14.85□□□□□ -0.03
NFKB1P19838 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
NFKB1P19838 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NFKB1P19838 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NFKB1P19838 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NFKB1P19838 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NFKB1P19838 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NFKB1P19838 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NFKB1P19838 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 TCAM1P-207ENST00000485295 1537 ntBASIC14.84□□□□□ -0.03
NFKB1P19838 TMBIM7P-202ENST00000641474 1516 ntBASIC14.84□□□□□ -0.03
NFKB1P19838 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NFKB1P19838 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.84□□□□□ -0.03
NFKB1P19838 AL161932.2-201ENST00000435436 679 ntBASIC14.84□□□□□ -0.03
NFKB1P19838 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.84□□□□□ -0.03
NFKB1P19838 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.84□□□□□ -0.03
NFKB1P19838 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.84□□□□□ -0.03
NFKB1P19838 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.84□□□□□ -0.03
NFKB1P19838 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.84□□□□□ -0.03
NFKB1P19838 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms