Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.06■□□□□ 0.16
EPB41P11171 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.06■□□□□ 0.16
EPB41P11171 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.06■□□□□ 0.16
EPB41P11171 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.06■□□□□ 0.16
EPB41P11171 AL358472.3-201ENST00000608147 415 ntBASIC16.06■□□□□ 0.16
EPB41P11171 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.06■□□□□ 0.16
EPB41P11171 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
EPB41P11171 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
EPB41P11171 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EPB41P11171 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.06■□□□□ 0.16
EPB41P11171 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 AC009093.10-201ENST00000641956 1442 ntBASIC16.05■□□□□ 0.16
EPB41P11171 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
EPB41P11171 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.05■□□□□ 0.16
EPB41P11171 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 AC112492.5-201ENST00000421897 457 ntBASIC16.05■□□□□ 0.16
EPB41P11171 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.05■□□□□ 0.16
EPB41P11171 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.05■□□□□ 0.16
EPB41P11171 AC234783.1-201ENST00000441761 496 ntBASIC16.05■□□□□ 0.16
EPB41P11171 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 AL035414.1-201ENST00000451327 857 ntBASIC16.05■□□□□ 0.16
EPB41P11171 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.05■□□□□ 0.16
EPB41P11171 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.05■□□□□ 0.16
EPB41P11171 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.05■□□□□ 0.16
EPB41P11171 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.05■□□□□ 0.16
EPB41P11171 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.05■□□□□ 0.16
EPB41P11171 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
EPB41P11171 PPY2P-201ENST00000582808 702 ntBASIC16.05■□□□□ 0.16
EPB41P11171 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 AC008825.2-201ENST00000603374 718 ntBASIC16.05■□□□□ 0.16
EPB41P11171 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.05■□□□□ 0.16
EPB41P11171 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 AC016397.2-201ENST00000624848 1985 ntBASIC16.05■□□□□ 0.16
EPB41P11171 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.05■□□□□ 0.16
EPB41P11171 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPB41P11171 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPB41P11171 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.04■□□□□ 0.16
EPB41P11171 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPB41P11171 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
EPB41P11171 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPB41P11171 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPB41P11171 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 AC011474.4-201ENST00000623523 2076 ntBASIC16.04■□□□□ 0.16
EPB41P11171 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EPB41P11171 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.04■□□□□ 0.16
EPB41P11171 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPB41P11171 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPB41P11171 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.04■□□□□ 0.16
EPB41P11171 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.04■□□□□ 0.16
EPB41P11171 GAPDHP21-201ENST00000450301 1010 ntBASIC16.04■□□□□ 0.16
EPB41P11171 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms