Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 AL360270.3-201ENST00000609118 1348 ntBASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.84□□□□□ -0.51
H2AFB1P0C5Y9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
H2AFB1P0C5Y9 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.83□□□□□ -0.51
H2AFB1P0C5Y9 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
H2AFB1P0C5Y9 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 HLA-H-201ENST00000383620 1096 ntBASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SAPCD2P3-201ENST00000455031 850 ntBASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AC007688.1-201ENST00000475592 759 ntBASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 AP001542.1-201ENST00000591314 200 ntBASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2AFB1P0C5Y9 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 FO393414.2-201ENST00000405153 598 ntBASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 TARDBPP1-201ENST00000442013 1203 ntBASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.82□□□□□ -0.52
H2AFB1P0C5Y9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms