Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.48□□□□□ -0.25
THBS1P07996 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
THBS1P07996 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
THBS1P07996 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
THBS1P07996 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.48□□□□□ -0.25
THBS1P07996 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.48□□□□□ -0.25
THBS1P07996 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.48□□□□□ -0.25
THBS1P07996 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
THBS1P07996 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
THBS1P07996 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
THBS1P07996 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
THBS1P07996 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 AL122018.1-201ENST00000446607 2310 ntBASIC13.47□□□□□ -0.25
THBS1P07996 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 BOLA2P3-201ENST00000404566 256 ntBASIC13.47□□□□□ -0.25
THBS1P07996 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.47□□□□□ -0.25
THBS1P07996 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 KRT43P-201ENST00000434019 910 ntBASIC13.47□□□□□ -0.25
THBS1P07996 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 CICP12-201ENST00000455801 843 ntBASIC13.47□□□□□ -0.25
THBS1P07996 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.47□□□□□ -0.25
THBS1P07996 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 SNX29P1-201ENST00000548357 1007 ntBASIC13.47□□□□□ -0.25
THBS1P07996 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.47□□□□□ -0.25
THBS1P07996 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 AL358472.3-201ENST00000608147 415 ntBASIC13.47□□□□□ -0.25
THBS1P07996 AC244669.2-201ENST00000612320 853 ntBASIC13.47□□□□□ -0.25
THBS1P07996 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
THBS1P07996 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.47□□□□□ -0.25
THBS1P07996 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 AC103798.2-201ENST00000624292 632 ntBASIC13.47□□□□□ -0.25
THBS1P07996 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 AL034417.3-201ENST00000641100 1043 ntBASIC13.47□□□□□ -0.25
THBS1P07996 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
THBS1P07996 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.47□□□□□ -0.25
THBS1P07996 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.47□□□□□ -0.25
THBS1P07996 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
THBS1P07996 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.46□□□□□ -0.25
THBS1P07996 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.46□□□□□ -0.25
THBS1P07996 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.46□□□□□ -0.25
THBS1P07996 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
THBS1P07996 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.46□□□□□ -0.25
THBS1P07996 C2orf69P2-201ENST00000562032 1123 ntBASIC13.46□□□□□ -0.25
THBS1P07996 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms