Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.73□□□□□ -0.21
CTSBP07858 AC006335.1-201ENST00000445200 547 ntBASIC13.73□□□□□ -0.21
CTSBP07858 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.73□□□□□ -0.21
CTSBP07858 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CTSBP07858 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSBP07858 AL022334.2-201ENST00000610000 484 ntBASIC13.73□□□□□ -0.21
CTSBP07858 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSBP07858 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSBP07858 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CTSBP07858 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CTSBP07858 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSBP07858 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSBP07858 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSBP07858 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSBP07858 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CTSBP07858 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 AC064801.2-201ENST00000625052 1303 ntBASIC13.72□□□□□ -0.21
CTSBP07858 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CTSBP07858 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 AC090505.1-201ENST00000430515 1834 ntBASIC13.72□□□□□ -0.21
CTSBP07858 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CTSBP07858 RPS9P1-201ENST00000419943 583 ntBASIC13.72□□□□□ -0.21
CTSBP07858 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSBP07858 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.72□□□□□ -0.21
CTSBP07858 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSBP07858 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.72□□□□□ -0.21
CTSBP07858 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 IGLV3-15-201ENST00000518356 244 ntBASIC13.72□□□□□ -0.21
CTSBP07858 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.72□□□□□ -0.21
CTSBP07858 MIR3188-201ENST00000583494 85 ntBASIC13.72□□□□□ -0.21
CTSBP07858 AC104506.1-201ENST00000609247 429 ntBASIC13.72□□□□□ -0.21
CTSBP07858 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.72□□□□□ -0.21
CTSBP07858 MIR6769A-201ENST00000617340 73 ntBASIC13.72□□□□□ -0.21
CTSBP07858 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CTSBP07858 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.72□□□□□ -0.21
CTSBP07858 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CTSBP07858 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.72□□□□□ -0.21
CTSBP07858 HSPA8P5-201ENST00000456928 2069 ntBASIC13.71□□□□□ -0.21
CTSBP07858 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSBP07858 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CTSBP07858 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSBP07858 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.71□□□□□ -0.21
CTSBP07858 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSBP07858 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.71□□□□□ -0.21
CTSBP07858 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSBP07858 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.71□□□□□ -0.21
CTSBP07858 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CTSBP07858 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CTSBP07858 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CTSBP07858 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms