Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 KRT8P29-201ENST00000420409 1371 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ST13P19-201ENST00000442505 1124 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AC021723.1-201ENST00000486306 515 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AC104982.3-201ENST00000581995 514 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 AL022313.4-201ENST00000562756 2046 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 TCAM1P-207ENST00000485295 1537 ntBASIC14.76□□□□□ -0.05
HLA-DQB2P05538 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DQB2P05538 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 VDAC1P1-201ENST00000439229 848 ntBASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 TUBB8P8-201ENST00000458717 1058 ntBASIC14.75□□□□□ -0.05
HLA-DQB2P05538 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.75□□□□□ -0.05
HLA-DQB2P05538 RPL18P13-201ENST00000478088 569 ntBASIC14.75□□□□□ -0.05
HLA-DQB2P05538 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AC005324.6-201ENST00000587972 613 ntBASIC14.75□□□□□ -0.05
HLA-DQB2P05538 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HLA-DQB2P05538 MST1P2-201ENST00000457982 2291 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 302.8 ms