Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCCBP05166 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCCBP05166 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
PCCBP05166 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCCBP05166 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCCBP05166 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCCBP05166 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PCCBP05166 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.43□□□□□ -0.1
PCCBP05166 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.43□□□□□ -0.1
PCCBP05166 XBP1P1-201ENST00000436573 652 ntBASIC14.43□□□□□ -0.1
PCCBP05166 OR2R1P-201ENST00000441404 914 ntBASIC14.43□□□□□ -0.1
PCCBP05166 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.43□□□□□ -0.1
PCCBP05166 RN7SL720P-201ENST00000488178 304 ntBASIC14.43□□□□□ -0.1
PCCBP05166 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.43□□□□□ -0.1
PCCBP05166 RHOQP1-201ENST00000555758 579 ntBASIC14.43□□□□□ -0.1
PCCBP05166 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCCBP05166 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.43□□□□□ -0.1
PCCBP05166 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCCBP05166 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCCBP05166 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCCBP05166 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.43□□□□□ -0.1
PCCBP05166 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PCCBP05166 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 AC239868.1-201ENST00000369385 493 ntBASIC14.42□□□□□ -0.1
PCCBP05166 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 AC073150.1-201ENST00000450406 1084 ntBASIC14.42□□□□□ -0.1
PCCBP05166 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.42□□□□□ -0.1
PCCBP05166 PGAM1P5-201ENST00000548011 764 ntBASIC14.42□□□□□ -0.1
PCCBP05166 AC105129.2-201ENST00000559536 390 ntBASIC14.42□□□□□ -0.1
PCCBP05166 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.42□□□□□ -0.1
PCCBP05166 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.42□□□□□ -0.1
PCCBP05166 AC124068.2-201ENST00000569473 1109 ntBASIC14.42□□□□□ -0.1
PCCBP05166 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.42□□□□□ -0.1
PCCBP05166 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PCCBP05166 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PCCBP05166 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PCCBP05166 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCCBP05166 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCCBP05166 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms