Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.08□□□□□ -0.32
APOA1P02647 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.08□□□□□ -0.32
APOA1P02647 PDPK2P-202ENST00000562415 1191 ntBASIC13.08□□□□□ -0.32
APOA1P02647 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.08□□□□□ -0.32
APOA1P02647 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.08□□□□□ -0.32
APOA1P02647 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOA1P02647 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.08□□□□□ -0.32
APOA1P02647 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 ALK-205ENST00000618119 4646 ntTSL 5 BASIC13.08□□□□□ -0.32
APOA1P02647 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.08□□□□□ -0.32
APOA1P02647 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 AC090643.2-201ENST00000623442 2029 ntBASIC13.08□□□□□ -0.32
APOA1P02647 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOA1P02647 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.08□□□□□ -0.32
APOA1P02647 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
APOA1P02647 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
APOA1P02647 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.07□□□□□ -0.32
APOA1P02647 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 SPDYE17-201ENST00000412399 783 ntBASIC13.07□□□□□ -0.32
APOA1P02647 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
APOA1P02647 RN7SL589P-201ENST00000481268 310 ntBASIC13.07□□□□□ -0.32
APOA1P02647 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.07□□□□□ -0.32
APOA1P02647 FAM86C2P-203ENST00000528684 1004 ntBASIC13.07□□□□□ -0.32
APOA1P02647 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.07□□□□□ -0.32
APOA1P02647 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 AC018845.2-201ENST00000568326 409 ntBASIC13.07□□□□□ -0.32
APOA1P02647 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.07□□□□□ -0.32
APOA1P02647 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.07□□□□□ -0.32
APOA1P02647 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.07□□□□□ -0.32
APOA1P02647 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 AL360270.3-201ENST00000609118 1348 ntBASIC13.07□□□□□ -0.32
APOA1P02647 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
APOA1P02647 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 AP3S2-216ENST00000617003 1561 ntBASIC13.07□□□□□ -0.32
APOA1P02647 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOA1P02647 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOA1P02647 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOA1P02647 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.06□□□□□ -0.32
APOA1P02647 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOA1P02647 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.06□□□□□ -0.32
APOA1P02647 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms