Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 AC015819.3-201ENST00000624305 2674 ntBASIC12.62□□□□□ -0.39
HLA-DQB1P01920 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 AC003102.2-201ENST00000589195 1469 ntBASIC12.62□□□□□ -0.39
HLA-DQB1P01920 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 RPSAP43-201ENST00000402237 625 ntBASIC12.62□□□□□ -0.39
HLA-DQB1P01920 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 RN7SL618P-201ENST00000477850 296 ntBASIC12.62□□□□□ -0.39
HLA-DQB1P01920 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 AC051619.7-201ENST00000568314 623 ntBASIC12.62□□□□□ -0.39
HLA-DQB1P01920 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.62□□□□□ -0.39
HLA-DQB1P01920 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 AL445209.1-201ENST00000607269 3491 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TLE1P1-201ENST00000422965 589 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 AC007969.1-201ENST00000433675 447 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TEX28P1-201ENST00000613479 1221 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TEX28P2-201ENST00000617764 1221 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 PRSS30P-206ENST00000641773 873 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 LINC01165-201ENST00000445190 1623 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 FAM90A11P-201ENST00000518378 2218 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 AC134407.3-201ENST00000624035 2139 ntBASIC12.61□□□□□ -0.39
HLA-DQB1P01920 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms