Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 FOXO1B-201ENST00000504678 1527 ntBASIC11.04□□□□□ -0.64
HLA-DQA1P01909 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HLA-DQA1P01909 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AL031719.1-201ENST00000623365 2587 ntBASIC11.03□□□□□ -0.64
HLA-DQA1P01909 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AC002056.1-201ENST00000395613 760 ntBASIC11.03□□□□□ -0.64
HLA-DQA1P01909 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 AL355102.3-201ENST00000554299 1678 ntBASIC11.03□□□□□ -0.64
HLA-DQA1P01909 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HLA-DQA1P01909 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms