Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HLA-AP01891 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.4□□□□□ -0.42
HLA-AP01891 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-AP01891 METTL21AP1-201ENST00000438852 635 ntBASIC12.4□□□□□ -0.42
HLA-AP01891 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 HLA-J-203ENST00000494367 1087 ntBASIC12.4□□□□□ -0.42
HLA-AP01891 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-AP01891 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.4□□□□□ -0.42
HLA-AP01891 AP001059.3-201ENST00000619053 235 ntBASIC12.4□□□□□ -0.42
HLA-AP01891 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-AP01891 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.4□□□□□ -0.42
HLA-AP01891 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
HLA-AP01891 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.4□□□□□ -0.42
HLA-AP01891 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
HLA-AP01891 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-AP01891 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
HLA-AP01891 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
HLA-AP01891 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
HLA-AP01891 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-AP01891 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-AP01891 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-AP01891 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.4□□□□□ -0.43
HLA-AP01891 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.4□□□□□ -0.43
HLA-AP01891 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.4□□□□□ -0.43
HLA-AP01891 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
HLA-AP01891 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-AP01891 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
HLA-AP01891 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.39□□□□□ -0.43
HLA-AP01891 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
HLA-AP01891 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-AP01891 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-AP01891 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-AP01891 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.39□□□□□ -0.43
HLA-AP01891 MIR6069-201ENST00000620069 79 ntBASIC12.39□□□□□ -0.43
HLA-AP01891 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-AP01891 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HLA-AP01891 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-AP01891 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
HLA-AP01891 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HLA-AP01891 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-AP01891 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-AP01891 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-AP01891 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-AP01891 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-AP01891 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-AP01891 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms