Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16■□□□□ 0.15
CD4P01730 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16■□□□□ 0.15
CD4P01730 PSMD4P1-201ENST00000433951 1109 ntBASIC16■□□□□ 0.15
CD4P01730 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16■□□□□ 0.15
CD4P01730 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16■□□□□ 0.15
CD4P01730 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16■□□□□ 0.15
CD4P01730 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16■□□□□ 0.15
CD4P01730 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16■□□□□ 0.15
CD4P01730 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD4P01730 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CD4P01730 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.99■□□□□ 0.15
CD4P01730 AC073869.2-201ENST00000417338 1026 ntBASIC15.99■□□□□ 0.15
CD4P01730 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.99■□□□□ 0.15
CD4P01730 AC024293.1-201ENST00000467930 498 ntBASIC15.99■□□□□ 0.15
CD4P01730 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.99■□□□□ 0.15
CD4P01730 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.99■□□□□ 0.15
CD4P01730 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.99■□□□□ 0.15
CD4P01730 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.99■□□□□ 0.15
CD4P01730 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 HERC2P11-201ENST00000562845 725 ntBASIC15.99■□□□□ 0.15
CD4P01730 AC100756.2-201ENST00000569537 736 ntBASIC15.99■□□□□ 0.15
CD4P01730 RN7SL596P-201ENST00000582123 288 ntBASIC15.99■□□□□ 0.15
CD4P01730 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.99■□□□□ 0.15
CD4P01730 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
CD4P01730 AP000322.3-201ENST00000608665 388 ntBASIC15.99■□□□□ 0.15
CD4P01730 AC244250.3-201ENST00000620749 366 ntBASIC15.99■□□□□ 0.15
CD4P01730 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.99■□□□□ 0.15
CD4P01730 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.99■□□□□ 0.15
CD4P01730 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CD4P01730 AP002353.1-201ENST00000528257 1599 ntBASIC15.99■□□□□ 0.15
CD4P01730 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.99■□□□□ 0.15
CD4P01730 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CD4P01730 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CD4P01730 AJ011931.1-201ENST00000618749 2492 ntBASIC15.99■□□□□ 0.15
CD4P01730 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CD4P01730 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.98■□□□□ 0.15
CD4P01730 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.98■□□□□ 0.15
CD4P01730 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CD4P01730 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 RN7SL396P-201ENST00000471086 295 ntBASIC15.98■□□□□ 0.15
CD4P01730 RPL18AP8-201ENST00000486071 528 ntBASIC15.98■□□□□ 0.15
CD4P01730 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.98■□□□□ 0.15
CD4P01730 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.98■□□□□ 0.15
CD4P01730 MIR2392-201ENST00000584881 84 ntBASIC15.98■□□□□ 0.15
CD4P01730 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.98■□□□□ 0.15
CD4P01730 AC007250.1-201ENST00000608934 338 ntBASIC15.98■□□□□ 0.15
CD4P01730 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.98■□□□□ 0.15
CD4P01730 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CD4P01730 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms