Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C1RP00736 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.31■□□□□ 0.04
C1RP00736 AC092638.2-201ENST00000441105 947 ntBASIC15.31■□□□□ 0.04
C1RP00736 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.31■□□□□ 0.04
C1RP00736 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.31■□□□□ 0.04
C1RP00736 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.31■□□□□ 0.04
C1RP00736 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.31■□□□□ 0.04
C1RP00736 AC027237.1-201ENST00000560942 655 ntBASIC15.31■□□□□ 0.04
C1RP00736 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.31■□□□□ 0.04
C1RP00736 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.31■□□□□ 0.04
C1RP00736 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 AC007326.1-201ENST00000604539 458 ntBASIC15.31■□□□□ 0.04
C1RP00736 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C1RP00736 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C1RP00736 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.31■□□□□ 0.04
C1RP00736 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.31■□□□□ 0.04
C1RP00736 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C1RP00736 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C1RP00736 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
C1RP00736 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 HLA-DMA-203ENST00000395305 777 ntBASIC15.3■□□□□ 0.04
C1RP00736 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.3■□□□□ 0.04
C1RP00736 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.3■□□□□ 0.04
C1RP00736 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.3■□□□□ 0.04
C1RP00736 RPL18AP3-201ENST00000462885 528 ntBASIC15.3■□□□□ 0.04
C1RP00736 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.3■□□□□ 0.04
C1RP00736 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
C1RP00736 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.3■□□□□ 0.04
C1RP00736 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.3■□□□□ 0.04
C1RP00736 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 AC007881.3-201ENST00000608897 607 ntBASIC15.3■□□□□ 0.04
C1RP00736 AC090386.2-201ENST00000623010 1039 ntBASIC15.3■□□□□ 0.04
C1RP00736 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C1RP00736 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.3■□□□□ 0.04
C1RP00736 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.3■□□□□ 0.04
C1RP00736 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.29■□□□□ 0.04
C1RP00736 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
C1RP00736 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms