Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
CNOT4O95628 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CNOT4O95628 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.05□□□□□ -0.32
CNOT4O95628 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.05□□□□□ -0.32
CNOT4O95628 SCARNA20.5-201ENST00000516991 142 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 AC126915.1-201ENST00000522847 1038 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.05□□□□□ -0.32
CNOT4O95628 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.05□□□□□ -0.32
CNOT4O95628 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 ACTG1P17-201ENST00000558391 1119 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.05□□□□□ -0.32
CNOT4O95628 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.05□□□□□ -0.32
CNOT4O95628 AC009955.4-201ENST00000597192 544 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 AL096828.3-201ENST00000615354 462 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.05□□□□□ -0.32
CNOT4O95628 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 KRT8P29-201ENST00000420409 1371 ntBASIC13.05□□□□□ -0.32
CNOT4O95628 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.05□□□□□ -0.32
CNOT4O95628 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CNOT4O95628 AC018442.1-201ENST00000421439 2061 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CNOT4O95628 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 AC138028.6-201ENST00000616106 1482 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 AC015656.1-201ENST00000624209 3578 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CNOT4O95628 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 AC012441.2-201ENST00000444843 739 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.04□□□□□ -0.32
CNOT4O95628 AC079328.1-201ENST00000560358 952 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 AC020914.3-201ENST00000594712 304 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 AC132192.2-201ENST00000596206 1147 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 AP000346.4-201ENST00000614827 381 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.04□□□□□ -0.32
CNOT4O95628 AC027601.3-201ENST00000622907 509 ntBASIC13.04□□□□□ -0.32
CNOT4O95628 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms