Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.71■□□□□ 0.59
LTN1O94822 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LTN1O94822 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
LTN1O94822 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
LTN1O94822 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 AP000354.1-201ENST00000396982 456 ntBASIC18.7■□□□□ 0.58
LTN1O94822 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 AC090136.2-201ENST00000517809 420 ntBASIC18.7■□□□□ 0.58
LTN1O94822 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
LTN1O94822 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LTN1O94822 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.7■□□□□ 0.58
LTN1O94822 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.7■□□□□ 0.58
LTN1O94822 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LTN1O94822 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LTN1O94822 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.7■□□□□ 0.58
LTN1O94822 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LTN1O94822 OR51A9P-201ENST00000422578 911 ntBASIC18.7■□□□□ 0.58
LTN1O94822 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.7■□□□□ 0.58
LTN1O94822 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 AC068831.5-201ENST00000557387 328 ntBASIC18.7■□□□□ 0.58
LTN1O94822 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LTN1O94822 GGNBP1-204ENST00000613113 887 ntBASIC18.7■□□□□ 0.58
LTN1O94822 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTN1O94822 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.7■□□□□ 0.58
LTN1O94822 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LTN1O94822 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LTN1O94822 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LTN1O94822 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LTN1O94822 OR10N1P-201ENST00000392758 869 ntBASIC18.69■□□□□ 0.58
LTN1O94822 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.69■□□□□ 0.58
LTN1O94822 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.69■□□□□ 0.58
LTN1O94822 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.69■□□□□ 0.58
LTN1O94822 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC18.69■□□□□ 0.58
LTN1O94822 AL590824.1-201ENST00000403828 1349 ntBASIC18.69■□□□□ 0.58
LTN1O94822 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LTN1O94822 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.69■□□□□ 0.58
LTN1O94822 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.69■□□□□ 0.58
LTN1O94822 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTN1O94822 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LTN1O94822 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.69■□□□□ 0.58
LTN1O94822 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
LTN1O94822 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
LTN1O94822 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
LTN1O94822 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LTN1O94822 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LTN1O94822 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC18.68■□□□□ 0.58
LTN1O94822 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 NRADDP-201ENST00000437305 691 ntBASIC18.68■□□□□ 0.58
LTN1O94822 VDAC1P11-201ENST00000458323 852 ntBASIC18.68■□□□□ 0.58
LTN1O94822 AC092896.1-201ENST00000465850 380 ntBASIC18.68■□□□□ 0.58
LTN1O94822 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.68■□□□□ 0.58
LTN1O94822 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.68■□□□□ 0.58
LTN1O94822 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.68■□□□□ 0.58
LTN1O94822 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LTN1O94822 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LTN1O94822 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms