Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF40O75150 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF40O75150 AC022137.2-201ENST00000503482 481 ntBASIC15.9■□□□□ 0.14
RNF40O75150 AC026410.3-201ENST00000514280 936 ntBASIC15.9■□□□□ 0.14
RNF40O75150 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF40O75150 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF40O75150 RN7SL560P-201ENST00000577943 264 ntBASIC15.9■□□□□ 0.14
RNF40O75150 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF40O75150 AL158211.2-201ENST00000607282 395 ntBASIC15.9■□□□□ 0.14
RNF40O75150 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF40O75150 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF40O75150 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF40O75150 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.9■□□□□ 0.14
RNF40O75150 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF40O75150 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF40O75150 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF40O75150 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 AC138969.2-201ENST00000532739 9932 ntBASIC15.89■□□□□ 0.13
RNF40O75150 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 DRD5P1-201ENST00000456605 1438 ntBASIC15.89■□□□□ 0.13
RNF40O75150 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF40O75150 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 RPL5P21-201ENST00000404620 815 ntBASIC15.89■□□□□ 0.13
RNF40O75150 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF40O75150 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF40O75150 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF40O75150 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF40O75150 AC107373.2-201ENST00000607735 490 ntBASIC15.89■□□□□ 0.13
RNF40O75150 AL133445.2-201ENST00000611191 527 ntBASIC15.89■□□□□ 0.13
RNF40O75150 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC15.89■□□□□ 0.13
RNF40O75150 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 AC008687.7-202ENST00000637404 953 ntBASIC15.89■□□□□ 0.13
RNF40O75150 AC068587.10-201ENST00000641210 219 ntBASIC15.89■□□□□ 0.13
RNF40O75150 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RNF40O75150 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF40O75150 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF40O75150 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF40O75150 AP001582.1-201ENST00000525856 295 ntBASIC15.88■□□□□ 0.13
RNF40O75150 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RNF40O75150 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms