Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.53□□□□□ -0.24
IDH3BO43837 BRI3BPP1-201ENST00000594224 787 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 KRT8P14-201ENST00000414254 1442 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
IDH3BO43837 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
IDH3BO43837 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IDH3BO43837 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.52□□□□□ -0.24
IDH3BO43837 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IDH3BO43837 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.52□□□□□ -0.24
IDH3BO43837 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.52□□□□□ -0.24
IDH3BO43837 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IDH3BO43837 AOC4P-203ENST00000566825 2289 ntBASIC13.52□□□□□ -0.24
IDH3BO43837 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IDH3BO43837 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.52□□□□□ -0.24
IDH3BO43837 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
IDH3BO43837 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.52□□□□□ -0.24
IDH3BO43837 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IDH3BO43837 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
IDH3BO43837 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.52□□□□□ -0.25
IDH3BO43837 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 AC114812.1-204ENST00000449669 728 ntBASIC13.52□□□□□ -0.25
IDH3BO43837 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 SPDYE18-201ENST00000510091 1050 ntBASIC13.52□□□□□ -0.25
IDH3BO43837 DOC2GP-202ENST00000514950 1163 ntBASIC13.52□□□□□ -0.25
IDH3BO43837 AC022616.1-201ENST00000518688 554 ntBASIC13.52□□□□□ -0.25
IDH3BO43837 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
IDH3BO43837 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 AL390754.1-201ENST00000619088 582 ntBASIC13.52□□□□□ -0.25
IDH3BO43837 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
IDH3BO43837 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 BEND3P3-201ENST00000611030 2440 ntBASIC13.52□□□□□ -0.25
IDH3BO43837 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.52□□□□□ -0.25
IDH3BO43837 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.52□□□□□ -0.25
IDH3BO43837 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IDH3BO43837 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
IDH3BO43837 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IDH3BO43837 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
IDH3BO43837 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
IDH3BO43837 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IDH3BO43837 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.51□□□□□ -0.25
IDH3BO43837 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
IDH3BO43837 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IDH3BO43837 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms