Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM1O00151 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.01□□□□□ -0.17
PDLIM1O00151 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM1O00151 AC004840.1-201ENST00000636359 365 ntBASIC14.01□□□□□ -0.17
PDLIM1O00151 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM1O00151 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM1O00151 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PDLIM1O00151 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.01□□□□□ -0.17
PDLIM1O00151 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.01□□□□□ -0.17
PDLIM1O00151 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDLIM1O00151 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14□□□□□ -0.17
PDLIM1O00151 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM1O00151 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PDLIM1O00151 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PDLIM1O00151 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 AC027020.2-201ENST00000602585 2389 ntBASIC14□□□□□ -0.17
PDLIM1O00151 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14□□□□□ -0.17
PDLIM1O00151 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14□□□□□ -0.17
PDLIM1O00151 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14□□□□□ -0.17
PDLIM1O00151 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14□□□□□ -0.17
PDLIM1O00151 MIR4745-201ENST00000577608 62 ntBASIC14□□□□□ -0.17
PDLIM1O00151 RN7SL204P-201ENST00000582831 262 ntBASIC14□□□□□ -0.17
PDLIM1O00151 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 AC092364.2-202ENST00000597012 1073 ntBASIC14□□□□□ -0.17
PDLIM1O00151 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM1O00151 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14□□□□□ -0.17
PDLIM1O00151 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14□□□□□ -0.17
PDLIM1O00151 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDLIM1O00151 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
PDLIM1O00151 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PDLIM1O00151 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PDLIM1O00151 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PDLIM1O00151 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.99□□□□□ -0.17
PDLIM1O00151 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.99□□□□□ -0.17
PDLIM1O00151 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.99□□□□□ -0.17
PDLIM1O00151 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms