Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PGK1P2-201ENST00000431702 1214 ntBASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 BCRP4-201ENST00000506079 804 ntBASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 Z98885.3-201ENST00000624882 1757 ntBASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
BIVM-ERCC5R4GMW8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 ENPP7P8-202ENST00000527856 1345 ntBASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 BX322534.1-201ENST00000635574 241 ntBASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC215524.1-201ENST00000635696 241 ntBASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC089987.1-201ENST00000551654 2209 ntBASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
BIVM-ERCC5R4GMW8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 NQO2-204ENST00000380454 851 ntTSL 2 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC136604.1-202ENST00000425471 771 ntBASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL590235.1-201ENST00000564650 861 ntBASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL157823.1-201ENST00000403727 628 ntBASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC132812.1-201ENST00000583145 892 ntBASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC23.37■■□□□ 1.33
BIVM-ERCC5R4GMW8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 TUBB4AP1-201ENST00000450755 1325 ntBASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 RCC2P1-201ENST00000452257 1476 ntBASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 UROS-201ENST00000368774 744 ntTSL 2 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 HNRNPA3P6-201ENST00000472163 1006 ntBASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC139713.2-207ENST00000641556 1292 ntBASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
BIVM-ERCC5R4GMW8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BIVM-ERCC5R4GMW8 AC132872.4-202ENST00000622924 2756 ntBASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms