Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC015818.9-201ENST00000591705 4582 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 LINC00563-201ENST00000566370 1400 ntBASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LINC01558Q9Y6Z2 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 AC008764.8-201ENST00000623966 2717 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CAPN10-AS1-201ENST00000567819 4000 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 INO80-211ENST00000616814 4272 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 AC148477.5-201ENST00000625164 1645 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 AC104457.1-201ENST00000401024 814 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 GUSBP5-201ENST00000418136 578 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 SLC25A1P2-201ENST00000430693 912 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 PAWRP1-201ENST00000451083 565 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 PHKG1P2-201ENST00000457537 863 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 AP002469.2-201ENST00000531724 424 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 BX088651.1-201ENST00000540551 451 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 AC105036.2-201ENST00000569468 176 ntBASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 USP10-219ENST00000570191 2717 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
LINC01558Q9Y6Z2 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LINC01558Q9Y6Z2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms