Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 MIR4754-201ENST00000582477 89 ntBASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 AC139712.1-201ENST00000378256 1875 ntBASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTDP1Q9Y5B0 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AC006486.2-201ENST00000624246 2199 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AC026320.2-201ENST00000434379 478 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 RN7SL258P-201ENST00000478664 300 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 MIR3188-201ENST00000583494 85 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 AC128714.1-201ENST00000637035 887 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 FAM90A2P-201ENST00000511144 1395 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 FAM90A25P-201ENST00000528404 1395 ntBASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CTDP1Q9Y5B0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AL627231.1-201ENST00000394467 1125 ntBASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AL592076.1-201ENST00000424448 303 ntBASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 MPRIPP1-201ENST00000452433 1089 ntBASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AL109837.1-201ENST00000603272 613 ntBASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 AL590440.2-201ENST00000641973 1595 ntBASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTDP1Q9Y5B0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms