Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CNN2P11-201ENST00000429351 262 ntBASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 AL139010.1-201ENST00000454878 894 ntBASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 RN7SL589P-201ENST00000481268 310 ntBASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 AC115284.2-201ENST00000624646 2054 ntBASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 MARK2P9-201ENST00000430958 1727 ntBASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRCH1Q9Y2L9 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC022400.8-201ENST00000623453 3599 ntBASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 LINC00567-201ENST00000569854 3409 ntBASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC015910.1-201ENST00000579400 975 ntBASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AL596442.2-201ENST00000610240 980 ntBASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRCH1Q9Y2L9 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.93□□□□□ -0.18
LRCH1Q9Y2L9 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms