Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 AP003398.1-201ENST00000531124 318 ntBASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 AC007952.4-201ENST00000573866 637 ntBASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 RN7SL470P-201ENST00000583069 259 ntBASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 AL132780.4-201ENST00000624870 1135 ntBASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 AL591122.2-201ENST00000624125 1853 ntBASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAK1Q9UPV9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ERP29P1-201ENST00000442902 706 ntBASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 AC004837.1-201ENST00000446267 564 ntBASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 LINC01815-202ENST00000641468 1409 ntBASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 CCT8L1P-201ENST00000465400 1674 ntBASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAK1Q9UPV9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 AC104640.1-201ENST00000562617 2109 ntBASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 AC011498.7-201ENST00000624986 2027 ntBASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAK1Q9UPV9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TRAK1Q9UPV9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 RN7SKP109-201ENST00000410592 316 ntBASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 SKA2-205ENST00000580541 689 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAK1Q9UPV9 MIR2392-201ENST00000584881 84 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms