Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AC234783.1-201ENST00000441761 496 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AC104596.2-201ENST00000512793 793 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AC124283.3-201ENST00000570869 594 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AC107373.2-201ENST00000607735 490 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 MIR6799-201ENST00000620297 69 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 AL033527.5-201ENST00000641382 801 ntBASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.11■□□□□ 0.17
CALCOCO1Q9P1Z2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 RPL5P21-201ENST00000404620 815 ntBASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 AC008735.3-201ENST00000596646 500 ntBASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 RPSAP52-203ENST00000622976 1023 ntBASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 INTS4P2-202ENST00000614726 2019 ntBASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.1■□□□□ 0.17
CALCOCO1Q9P1Z2 AC106818.1-201ENST00000623223 3242 ntBASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CALCOCO1Q9P1Z2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms