Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 C1QBPP1-201ENST00000400117 770 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AC099336.1-201ENST00000417053 1171 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 GCOM2-201ENST00000509133 1104 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AC068587.3-201ENST00000526613 355 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AC120045.2-201ENST00000567334 178 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AC105206.1-202ENST00000314927 2368 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 HSPA8P5-201ENST00000456928 2069 ntBASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 RNU1-114P-201ENST00000365297 166 ntBASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AP001889.1-201ENST00000525414 633 ntBASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ENPP7P5-201ENST00000541031 1031 ntBASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AL583810.1-201ENST00000553344 1045 ntBASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 AC011498.7-201ENST00000624986 2027 ntBASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 MSTO2P-201ENST00000314835 1709 ntBASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXP3Q9BZS1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FOXP3Q9BZS1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms