Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDH11XQ9BZA7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDH11XQ9BZA7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH11XQ9BZA7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH11XQ9BZA7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH11XQ9BZA7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDH11XQ9BZA7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AC092573.1-201ENST00000433054 884 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 KRT18P46-201ENST00000435568 1279 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 RN7SL582P-201ENST00000491078 279 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AC008026.2-201ENST00000495438 348 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 SLC25A15P3-201ENST00000505530 290 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AC010632.2-201ENST00000588369 1224 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AC008972.2-201ENST00000606587 494 ntBASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH11XQ9BZA7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 AC244197.1-201ENST00000456494 951 ntBASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 TREHP1-201ENST00000531328 465 ntBASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 RN7SL455P-201ENST00000580629 282 ntBASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 AC105917.1-201ENST00000506637 2539 ntBASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 PDXDC2P-206ENST00000534700 1315 ntBASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDH11XQ9BZA7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms