Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC098614.1-201ENST00000368528 745 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 SOCS2P1-201ENST00000417727 557 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TMEM198B-204ENST00000484016 896 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 WASH4P-201ENST00000564273 1246 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 AL008721.1-201ENST00000609964 604 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.42□□□□□ -0.26
SNX18Q96RF0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNX18Q96RF0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.42□□□□□ -0.26
SNX18Q96RF0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 AGGF1P1-201ENST00000509500 2073 ntBASIC13.41□□□□□ -0.26
SNX18Q96RF0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 INE1-201ENST00000456273 945 ntBASIC13.41□□□□□ -0.26
SNX18Q96RF0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SNX18Q96RF0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SNX18Q96RF0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms