Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX27Q96L92 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNX27Q96L92 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 NORAD-201ENST00000565493 5339 ntBASIC15.69■□□□□ 0.1
SNX27Q96L92 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX27Q96L92 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX27Q96L92 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SNX27Q96L92 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 MIR3188-201ENST00000583494 85 ntBASIC15.69■□□□□ 0.1
SNX27Q96L92 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.69■□□□□ 0.1
SNX27Q96L92 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.69■□□□□ 0.1
SNX27Q96L92 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 COX6A1P2-201ENST00000620597 330 ntBASIC15.69■□□□□ 0.1
SNX27Q96L92 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNX27Q96L92 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SNX27Q96L92 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX27Q96L92 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 AC007274.2-201ENST00000421675 662 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 SERBP1P2-201ENST00000436888 1164 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 RN7SL8P-201ENST00000461771 266 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 AC116345.2-201ENST00000512837 523 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.68■□□□□ 0.1
SNX27Q96L92 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.68■□□□□ 0.1
SNX27Q96L92 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 MIR4754-201ENST00000582477 89 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 AL353770.1-201ENST00000614915 403 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 AP001065.2-201ENST00000617205 644 ntBASIC15.68■□□□□ 0.1
SNX27Q96L92 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX27Q96L92 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX27Q96L92 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.68■□□□□ 0.1
SNX27Q96L92 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX27Q96L92 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNX27Q96L92 AC067930.6-201ENST00000623257 4947 ntBASIC15.67■□□□□ 0.1
SNX27Q96L92 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SNX27Q96L92 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.67■□□□□ 0.1
SNX27Q96L92 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SNX27Q96L92 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms