Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
DDX1Q92499 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
DDX1Q92499 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
DDX1Q92499 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
DDX1Q92499 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.52■□□□□ 0.08
DDX1Q92499 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.52■□□□□ 0.08
DDX1Q92499 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
DDX1Q92499 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
DDX1Q92499 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.52■□□□□ 0.07
DDX1Q92499 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
DDX1Q92499 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.52■□□□□ 0.07
DDX1Q92499 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.52■□□□□ 0.07
DDX1Q92499 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.52■□□□□ 0.07
DDX1Q92499 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.52■□□□□ 0.07
DDX1Q92499 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
DDX1Q92499 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.52■□□□□ 0.07
DDX1Q92499 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
DDX1Q92499 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 AC244394.1-201ENST00000435000 1665 ntBASIC15.51■□□□□ 0.07
DDX1Q92499 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 KLF2P1-201ENST00000447438 1042 ntBASIC15.51■□□□□ 0.07
DDX1Q92499 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 MIR3619-201ENST00000579667 83 ntBASIC15.51■□□□□ 0.07
DDX1Q92499 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.51■□□□□ 0.07
DDX1Q92499 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
DDX1Q92499 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
DDX1Q92499 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DDX1Q92499 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
DDX1Q92499 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
DDX1Q92499 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DDX1Q92499 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.5■□□□□ 0.07
DDX1Q92499 TUBB8P4-201ENST00000511806 1324 ntBASIC15.5■□□□□ 0.07
DDX1Q92499 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms