Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 AC019193.1-201ENST00000506678 823 ntBASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 U62317.3-201ENST00000608319 855 ntBASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 ACE3P-201ENST00000423435 1973 ntBASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 OR2K2-202ENST00000374428 1038 ntBASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 FGFR3P1-201ENST00000449999 601 ntBASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AL109837.1-201ENST00000603272 613 ntBASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AC018635.2-201ENST00000608625 364 ntBASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 MRPL37P1-201ENST00000592451 1337 ntBASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SHKBP1Q8TBC3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SHKBP1Q8TBC3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms