Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMARCC2Q8TAQ2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 AC064801.2-201ENST00000625052 1303 ntBASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CICP12-201ENST00000455801 843 ntBASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 AC100850.1-201ENST00000506768 649 ntBASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 AL096828.3-201ENST00000615354 462 ntBASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 AC090643.2-201ENST00000623442 2029 ntBASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMARCC2Q8TAQ2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 HSPB1P2-201ENST00000448722 546 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AL591846.1-201ENST00000451736 433 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC027237.1-201ENST00000560942 655 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 MIR4525-201ENST00000580000 75 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC104982.3-201ENST00000581995 514 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC008825.2-201ENST00000603374 718 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AL118558.3-201ENST00000607414 1079 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC005695.3-201ENST00000614522 232 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AL136301.1-201ENST00000615830 422 ntBASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms