Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC055876.2-201ENST00000531834 546 ntBASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AP005019.2-201ENST00000615104 511 ntBASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BBS1Q8NFJ9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AL365181.3-201ENST00000605886 3222 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC020658.7-201ENST00000624274 2442 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC093004.1-201ENST00000508850 424 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC092552.1-201ENST00000547243 906 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SORD2P-201ENST00000558556 1069 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC138696.2-201ENST00000607376 223 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC093726.1-201ENST00000608064 963 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC099568.2-201ENST00000609194 695 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 AC019294.4-201ENST00000561777 2905 ntBASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BBS1Q8NFJ9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BBS1Q8NFJ9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms