Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 ANKRD19P-201ENST00000338192 862 ntBASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 MIR326-201ENST00000362220 95 ntBASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 RNA5SP412-201ENST00000516234 123 ntBASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 SNX29P1-201ENST00000548357 1007 ntBASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 EEF1DP1-201ENST00000585891 896 ntBASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 AC006504.5-208ENST00000588784 2401 ntBASIC13.99□□□□□ -0.17
SRFBP1Q8NEF9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 KRT8P28-201ENST00000433288 1390 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC099336.1-201ENST00000417053 1171 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 ATP5G2P4-201ENST00000442175 420 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC010328.2-201ENST00000597698 1111 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC097359.2-201ENST00000604992 2389 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC005252.3-201ENST00000623855 2258 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AL023775.1-201ENST00000454907 1746 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC005840.4-201ENST00000541242 2494 ntBASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SRFBP1Q8NEF9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRFBP1Q8NEF9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms