Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HIPK4Q8NE63 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 CNN2P2-201ENST00000443536 909 ntBASIC14.28□□□□□ -0.12
HIPK4Q8NE63 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 CNN2P3-201ENST00000450201 906 ntBASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 HLA-J-203ENST00000494367 1087 ntBASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AC027612.4-201ENST00000605371 583 ntBASIC14.28□□□□□ -0.12
HIPK4Q8NE63 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 RN7SL832P-201ENST00000607781 1756 ntBASIC14.28□□□□□ -0.12
HIPK4Q8NE63 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AL136317.3-201ENST00000618497 906 ntBASIC14.28□□□□□ -0.12
HIPK4Q8NE63 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HIPK4Q8NE63 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIPK4Q8NE63 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 KRT18P13-201ENST00000400056 1290 ntBASIC14.27□□□□□ -0.13
HIPK4Q8NE63 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 SNHG9-202ENST00000564014 471 ntBASIC14.27□□□□□ -0.13
HIPK4Q8NE63 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 AC004461.2-201ENST00000629517 803 ntBASIC14.27□□□□□ -0.13
HIPK4Q8NE63 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms