Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC011498.7-201ENST00000624986 2027 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AL512384.1-201ENST00000406683 331 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 ARSEP1-201ENST00000420443 635 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AC016694.1-201ENST00000434179 700 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 RN7SL692P-201ENST00000464677 288 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AP003171.2-201ENST00000528208 925 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AL596325.1-201ENST00000563991 1082 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 BTNL10-201ENST00000595971 695 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AC008735.3-201ENST00000596646 500 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AC006453.4-201ENST00000636949 1252 ntBASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LSMEM1Q8N8F7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AC011474.4-201ENST00000623523 2076 ntBASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 TTTY23B-201ENST00000442790 549 ntBASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 BCRP2-202ENST00000447763 634 ntBASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 INE1-201ENST00000456273 945 ntBASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 BCRP6-201ENST00000510112 632 ntBASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 BCRP7-201ENST00000511549 544 ntBASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LSMEM1Q8N8F7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms