Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC60Q8IWA6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 CAP2P1-201ENST00000557743 1390 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 RN7SL277P-201ENST00000481521 288 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 RN7SL67P-201ENST00000492147 296 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 IGLV3-15-201ENST00000518356 244 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 PRKXP1-201ENST00000561423 1122 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 AC104506.1-201ENST00000609247 429 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 AL591471.1-201ENST00000621855 229 ntBASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC60Q8IWA6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 AC026320.2-201ENST00000434379 478 ntBASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 MIR3677-201ENST00000578964 60 ntBASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 LINC01783-202ENST00000614408 828 ntBASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 BX284668.2-205ENST00000619677 828 ntBASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC60Q8IWA6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 AC067930.6-201ENST00000623257 4947 ntBASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC60Q8IWA6 RN7SL832P-201ENST00000607781 1756 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms