Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 BAK1P2-201ENST00000532665 631 ntBASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AC005586.2-201ENST00000563946 837 ntBASIC17.92■□□□□ 0.46
COL23A1Q86Y22 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 NEK4P3-201ENST00000604859 544 ntBASIC17.92■□□□□ 0.46
COL23A1Q86Y22 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.92■□□□□ 0.46
COL23A1Q86Y22 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AC126755.5-201ENST00000622756 267 ntBASIC17.92■□□□□ 0.46
COL23A1Q86Y22 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.91■□□□□ 0.46
COL23A1Q86Y22 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 CTBP2P6-201ENST00000526402 1229 ntBASIC17.91■□□□□ 0.46
COL23A1Q86Y22 AL591424.3-201ENST00000614278 872 ntBASIC17.91■□□□□ 0.46
COL23A1Q86Y22 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 ACE3P-201ENST00000423435 1973 ntBASIC17.91■□□□□ 0.46
COL23A1Q86Y22 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL23A1Q86Y22 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 RPL3P2-204ENST00000413027 1203 ntBASIC17.9■□□□□ 0.46
COL23A1Q86Y22 AC073210.1-201ENST00000414799 232 ntBASIC17.9■□□□□ 0.46
COL23A1Q86Y22 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 RN7SL455P-201ENST00000580629 282 ntBASIC17.9■□□□□ 0.46
COL23A1Q86Y22 AC005777.1-201ENST00000588332 187 ntBASIC17.9■□□□□ 0.46
COL23A1Q86Y22 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL23A1Q86Y22 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.89■□□□□ 0.46
COL23A1Q86Y22 AC117503.4-201ENST00000623229 1418 ntBASIC17.89■□□□□ 0.46
COL23A1Q86Y22 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
COL23A1Q86Y22 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
COL23A1Q86Y22 AC136621.1-201ENST00000624017 2304 ntBASIC17.89■□□□□ 0.46
COL23A1Q86Y22 AC007952.5-201ENST00000572818 1486 ntBASIC17.89■□□□□ 0.45
COL23A1Q86Y22 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms