Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 MBLAC2-202ENST00000514906 1936 ntBASIC13.53□□□□□ -0.24
VRK2Q86Y07 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 IGHV3-72-202ENST00000621503 303 ntBASIC13.53□□□□□ -0.24
VRK2Q86Y07 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
VRK2Q86Y07 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.52□□□□□ -0.24
VRK2Q86Y07 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.52□□□□□ -0.24
VRK2Q86Y07 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.52□□□□□ -0.24
VRK2Q86Y07 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
VRK2Q86Y07 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
VRK2Q86Y07 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC007551.1-201ENST00000457394 519 ntBASIC13.52□□□□□ -0.25
VRK2Q86Y07 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 COX5BP1-201ENST00000507622 393 ntBASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC073413.1-201ENST00000603927 732 ntBASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VRK2Q86Y07 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.52□□□□□ -0.25
VRK2Q86Y07 AC006453.4-201ENST00000636949 1252 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms