Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RHOXF1P1-202ENST00000635473 501 ntBASIC13.02□□□□□ -0.33
RTTNQ86VV8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 CICP16-201ENST00000502609 2813 ntBASIC13.01□□□□□ -0.33
RTTNQ86VV8 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 AL603764.1-201ENST00000636452 321 ntBASIC13.01□□□□□ -0.33
RTTNQ86VV8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 AC138466.3-201ENST00000619983 221 ntBASIC13.01□□□□□ -0.33
RTTNQ86VV8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.01□□□□□ -0.33
RTTNQ86VV8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTTNQ86VV8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 AC055811.4-201ENST00000624039 1754 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 MIR326-201ENST00000362220 95 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13□□□□□ -0.33
RTTNQ86VV8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 AL662890.1-201ENST00000396818 632 ntBASIC13□□□□□ -0.33
RTTNQ86VV8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13□□□□□ -0.33
RTTNQ86VV8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13□□□□□ -0.33
RTTNQ86VV8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
RTTNQ86VV8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13□□□□□ -0.33
RTTNQ86VV8 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms