Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 AL158070.2-201ENST00000623713 1621 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 TOMM22P5-201ENST00000416399 439 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SPDYE11-202ENST00000450699 704 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SPDYE9P-201ENST00000570642 692 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SLC25A6P4-201ENST00000586535 553 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SPDYE10P-202ENST00000612005 668 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SPDYE8P-202ENST00000612377 668 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 AP001972.5-201ENST00000624624 2338 ntBASIC13.8□□□□□ -0.2
LPCAT4Q643R3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LPCAT4Q643R3 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AL391647.1-201ENST00000395664 511 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 ADH5P3-201ENST00000433842 1137 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AC009078.2-202ENST00000463353 338 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AC145285.3-201ENST00000564603 959 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AC025048.3-201ENST00000590609 569 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 AC005702.4-201ENST00000618393 416 ntBASIC13.79□□□□□ -0.2
LPCAT4Q643R3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.79□□□□□ -0.2
LPCAT4Q643R3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms