Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 INE2-201ENST00000630399 1874 ntBASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 AL139094.1-201ENST00000405549 1188 ntBASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 AC022137.2-201ENST00000503482 481 ntBASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 AP001582.1-201ENST00000525856 295 ntBASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ATPAF1Q5TC12 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC007389.4-201ENST00000454674 793 ntBASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC093433.1-201ENST00000458048 571 ntBASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATPAF1Q5TC12 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms