Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 ZNF259P1-201ENST00000407656 1365 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 MED15P5-201ENST00000423150 992 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 AL450487.1-201ENST00000426799 995 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 AL592309.1-201ENST00000443127 649 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 AC004840.1-201ENST00000636359 365 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 AC026271.4-201ENST00000578214 1833 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 TUBB3P1-201ENST00000405796 1332 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RBM48Q5RL73 AC003102.2-201ENST00000589195 1469 ntBASIC13.36□□□□□ -0.27
RBM48Q5RL73 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RBM48Q5RL73 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 KRT18P3-201ENST00000451602 1288 ntBASIC13.35□□□□□ -0.27
RBM48Q5RL73 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RBM48Q5RL73 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RBM48Q5RL73 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms