Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 TUBB8P8-201ENST00000458717 1058 ntBASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AC024681.1-201ENST00000521917 487 ntBASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AC134698.3-201ENST00000523880 214 ntBASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC144BQ3MJ40 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MST1P2-201ENST00000457982 2291 ntBASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AC005324.6-201ENST00000587972 613 ntBASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AC002472.3-201ENST00000640124 621 ntBASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 AL137783.1-201ENST00000623494 1896 ntBASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC144BQ3MJ40 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC144BQ3MJ40 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AC009093.2-202ENST00000620513 2079 ntBASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 NUP210P1-202ENST00000504322 710 ntBASIC16.95■□□□□ 0.3
CCDC144BQ3MJ40 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms