Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 PSAT1P2-201ENST00000426107 972 ntBASIC13.31□□□□□ -0.28
CACNA1BQ00975 AL035414.1-201ENST00000451327 857 ntBASIC13.31□□□□□ -0.28
CACNA1BQ00975 AC007690.1-201ENST00000451924 468 ntBASIC13.31□□□□□ -0.28
CACNA1BQ00975 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CACNA1BQ00975 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.31□□□□□ -0.28
CACNA1BQ00975 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CACNA1BQ00975 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 OR8T1P-201ENST00000421347 918 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 FTLP3-201ENST00000427242 528 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 CHCHD2P6-201ENST00000454346 447 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 HNRNPA3P6-201ENST00000472163 1006 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 RN7SL827P-201ENST00000607480 288 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 BX510359.7-201ENST00000619819 630 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AL591122.2-201ENST00000624125 1853 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC099398.1-201ENST00000567919 2776 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 RPL18AP16-201ENST00000424057 531 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 AC093700.1-201ENST00000503348 717 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 LINC00244-201ENST00000625073 613 ntBASIC13.3□□□□□ -0.28
CACNA1BQ00975 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CACNA1BQ00975 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CACNA1BQ00975 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CACNA1BQ00975 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms