Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NR1H2P55055 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H2P55055 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.96□□□□□ -0.17
NR1H2P55055 AC011495.1-201ENST00000498085 584 ntBASIC13.96□□□□□ -0.17
NR1H2P55055 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 AC055876.2-201ENST00000531834 546 ntBASIC13.96□□□□□ -0.17
NR1H2P55055 AC097359.3-201ENST00000603982 1210 ntBASIC13.96□□□□□ -0.17
NR1H2P55055 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NR1H2P55055 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.96□□□□□ -0.18
NR1H2P55055 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
NR1H2P55055 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H2P55055 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H2P55055 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H2P55055 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.96□□□□□ -0.18
NR1H2P55055 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H2P55055 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NR1H2P55055 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H2P55055 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NR1H2P55055 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 SPDYE19P-201ENST00000338590 713 ntBASIC13.95□□□□□ -0.18
NR1H2P55055 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 FO393414.2-201ENST00000405153 598 ntBASIC13.95□□□□□ -0.18
NR1H2P55055 AP006294.1-201ENST00000415407 339 ntBASIC13.95□□□□□ -0.18
NR1H2P55055 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 API5-211ENST00000534695 560 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 AC044860.1-202ENST00000559481 777 ntBASIC13.95□□□□□ -0.18
NR1H2P55055 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 REXO1L4P-201ENST00000605109 1937 ntBASIC13.95□□□□□ -0.18
NR1H2P55055 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H2P55055 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms